Well, I didn't drill through the brass plugs. I simply enlarged the existing holes, without going all the way through, large enough to get a #4 sheet metal screw started. Then I pried out the plugs using a pair of needle nose pliers. So, I am certain the air screws weren't disturbed.
As far as the fix, since a run time readjustment wasn't very fruitful (limited access into a hot space), I just readjusted all four to 2.2 turns out and the bike is running 10 times better. The off idle hesitation is completely gone. Off course, in part, this may be due to the fact that with a more healthy and stable idle I was finally able to properly re-balance the carbs.
Regards