Is it the whole kickstand, or just the piece that sticks out to make deploying the stand easy?
If it's just the little metal rod piece, bend it - or cut it and reweld it to a better location.
I've got NWS jackup plates on mine that move the stock pegs up and back ~1" and don't have any problem with mine, but I guess the Holeshot setup must move the pegs more than that... though I thought the two relocated about the same...